Here are all the stages of phase 2, in order of execution, with links to their descriptions:

  1. TransferOwner
  2. LargeMeteors
  3. MeteorShowers
  4. AntiCloak_1
  5. DeluxeSuperSpy
  6. NewNativesAppear
  7. RobMission
  8. GamblingShips
  9. CargoDump
  10. CargoTransfer
  11. TrimShipCargo
  12. CrewExchange
  13. Training
  14. BeamTransfers
  15. GatherMission
  16. BeamUpCredits
  17. MinefieldDecay
  18. MineLaying
  19. MinesDestroyMines
  20. MineSweeping
  21. MinefieldScan
  22. Old position of WormholeScan (until v4.0d)
  23. WebDraining
  24. MoveIonStorms
  25. IonStormEffects
  26. NewIonStorms
  27. IonStormReports
  28. SpecialMissions_1 (Super Refit, Hiss, Self Repair)
  29. BuildFighters
  30. BuildTorpedoes
  31. Alchemy
  32. ShipBuildOrders
  33. ShipBuilding_1
  34. DumpOldBaseParts
  35. BaseMissions_1 (Fix/Recycle, Maximize Defense, Load Torps, Force Surrender)
  36. SupplyRepair_1
  37. BoardingParties
  38. FreeFighters
  39. TowResolution
  40. Movement
  41. GloryDevices
  42. Chunneling
  43. AntiCloak_2
  44. ColonizeMission
  45. SupplyRepair_2
  46. BaseMissions_2 (Refuel, Repair base, Unload)
  47. Combat
  48. SupplyRepair_3
  49. Terraforming
  50. WormholeScan
  51. SensorSweep
  52. SpecialMissions_2 (Pillage, RGA, Dark Sense)
  53. PlanetaryProduction
  54. PlanetaryHappiness
  55. PlanetaryTaxation
  56. PlanetaryGrowth
  57. PlanetaryLosses (Overpopulation dies, riots, structure decay)
  58. ShipBuilding_2
  59. Assimilation
  60. SuperSpyMission
  61. ShipExploration
  62. Experience
This is a testing version.
It may be incomplete, and have more bugs (or features) than the public live version at planetscentral.com.